MLOC_36304 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.9455113.721114.64838.25413
LEAShoots from the seedlings (10 cm shoot stage)8.615077.450464.690824.23817
INF1Young developing inflorescences (5mm)33.323730.999129.926217.2385
INF2Developing inflorescences (1-1.5 cm)34.304230.866428.008224.4208
ROORoots from the seedlings (10 cm shoot stage)6.8119110.63719.545777.48793
NODDeveloping tillers at six leaf stage, 3rd internode2.896133.178438.485818.47526
CAR5Developing grain, bracts removed (5 DPA)15.241614.230814.88019.30699
CAR15Developing grain, bracts removed (15 DPA)6.033874.540455.502898.07293



CDS Structure of MLOC_36304






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36304.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36304.1CUST_12193_PI427708083AvailableAvailablecontig_2546566 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g31000.1 -3 4e-92 312 168/215 (78%) 13104.m02951 protein methyltransferase domain containing protein, expressed
TAIR PP10 AT2G31740.1 -3 8e-50 189 108/228 (47%) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr2:13491053-13495009 REVERSE LENGTH=760