MLOC_36150 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.694948.215066.9372311.7897
LEAShoots from the seedlings (10 cm shoot stage)8.7442410.09237.8517810.738
INF1Young developing inflorescences (5mm)11.080612.17113.162214.9796
INF2Developing inflorescences (1-1.5 cm)36.387922.476923.217740.6448
ROORoots from the seedlings (10 cm shoot stage)4.805557.354157.1236116.1576
NODDeveloping tillers at six leaf stage, 3rd internode8.298558.282866.7550539.0237
CAR5Developing grain, bracts removed (5 DPA)8.97599.239917.5532412.7157
CAR15Developing grain, bracts removed (15 DPA)5.801925.512646.2423219.3163



CDS Structure of MLOC_36150






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_36150.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_36150.1CUST_5087_PI427708083AvailableAvailablecontig_253737 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g39550.3 -1 1e-22 99 52/69 (75%) 13102.m04379 protein calcium-binding mitochondrial protein anon-60Da, putative, expressed
TAIR PP10 AT1G65540.1 -1 3e-14 72 36/69 (52%) LETM1-like protein | chr1:24362382-24366011 REVERSE LENGTH=736