MLOC_360 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 170.757 | 207.797 | 187.751 | 207.717 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 143.789 | 122.357 | 122.601 | 119.295 |
| INF1 | Young developing inflorescences (5mm) | 278.443 | 257.158 | 220.327 | 227.232 |
| INF2 | Developing inflorescences (1-1.5 cm) | 166.472 | 177.187 | 151.36 | 192.955 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 188.629 | 267.571 | 190.617 | 324.75 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 46.4247 | 63.2418 | 71.7356 | 219.473 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 178.743 | 150.401 | 153.864 | 165.69 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 113.494 | 106.789 | 72.3554 | 244.527 |
CDS Structure of MLOC_360
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_360.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g32030.1 |
-1 |
0.0 |
1523 |
769/819 (94%) |
13102.m03460 protein elongation factor, putative, expressed |
| TAIR PP10 |
AT1G56070.1 |
-1 |
0.0 |
1471 |
739/819 (90%) |
| Symbols: LOS1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:20968245-20971077 REVERSE LENGTH=843 |
