MLOC_35977 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.469112.9586.619540
LEAShoots from the seedlings (10 cm shoot stage)34.788333.018927.17380
INF1Young developing inflorescences (5mm)9.453989.1278317.68270
INF2Developing inflorescences (1-1.5 cm)15.38299.2994312.02230
ROORoots from the seedlings (10 cm shoot stage)13.713312.934410.65580
NODDeveloping tillers at six leaf stage, 3rd internode22.427321.188430.90960
CAR5Developing grain, bracts removed (5 DPA)15.285321.325218.52370
CAR15Developing grain, bracts removed (15 DPA)3.01952.542141.855450



CDS Structure of MLOC_35977






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354319
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354319CUST_19354_PI427708080NoneNoneNone
MLOC_28148.1NoneAvailableNonecontig_189545 (Mapped)
MLOC_30289.1NoneAvailableNonecontig_2081103 (Not mapped)
MLOC_35977.1NoneAvailableNonecontig_2528662 (Not mapped)
MLOC_41749.1NoneAvailableNonecontig_2604127 (Not mapped)
MLOC_49768.1NoneAvailableNonecontig_348032 (Mapped)
MLOC_78345.1NoneAvailableAvailablecontig_7977 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----