MLOC_35957 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.970826.899627.967227.1116
LEAShoots from the seedlings (10 cm shoot stage)28.63318.187419.829119.3369
INF1Young developing inflorescences (5mm)8.636617.065188.445726.48893
INF2Developing inflorescences (1-1.5 cm)5.291586.323794.729045.8831
ROORoots from the seedlings (10 cm shoot stage)34.37636.973636.129744.4427
NODDeveloping tillers at six leaf stage, 3rd internode48.585439.731143.1092126.498
CAR5Developing grain, bracts removed (5 DPA)11.10112.809513.80611.6152
CAR15Developing grain, bracts removed (15 DPA)4.995045.152534.8757110.9699



CDS Structure of MLOC_35957






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252358.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252358.1CUST_19143_PI427708080NoneNoneNone
MLOC_25463.1NoneAvailableNonecontig_1693002 (Mapped)
MLOC_28012.1NoneAvailableNonecontig_188327 (Not mapped)
MLOC_28132.1NoneAvailableNonecontig_189406 (Mapped)
MLOC_35957.1NoneAvailableAvailablecontig_252742 (Mapped)
MLOC_41448.2NoneAvailableNonecontig_2588825 (Mapped)
MLOC_59689.1NoneAvailableNonecontig_438270 (Mapped)
MLOC_61546.2NoneAvailableNonecontig_45617 (Mapped)
MLOC_79125.1NoneAvailableNonecontig_835039 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----