MLOC_35889 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.1385720
LEAShoots from the seedlings (10 cm shoot stage)000.3273120
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.08295290.1526300
ROORoots from the seedlings (10 cm shoot stage)00.10863200
NODDeveloping tillers at six leaf stage, 3rd internode00.02909200
CAR5Developing grain, bracts removed (5 DPA)1.92530.4469251.312040
CAR15Developing grain, bracts removed (15 DPA)2.747313.24813.699960



CDS Structure of MLOC_35889






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK366750
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366750CUST_14239_PI427708083NoneNoneNone
MLOC_2745.1NoneAvailableNonecontig_12451 (Not mapped)
MLOC_29002.1NoneAvailableAvailablecontig_196560 (Mapped)
MLOC_33446.1NoneAvailableNonecontig_2374349 (Not mapped)
MLOC_35889.1NoneAvailableNonecontig_252519 (Mapped)
MLOC_42324.1NoneAvailableNonecontig_2637264 (Not mapped)
MLOC_47875.1NoneAvailableNonecontig_313794 (Not mapped)
MLOC_47897.1NoneAvailableNonecontig_31412 (Not mapped)
MLOC_48982.1NoneAvailableNonecontig_333254 (Not mapped)
MLOC_56476.1NoneAvailableNonecontig_40871 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----