- Predicted Gene MLOC_35875
MLOC_35875 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 993.201 | 1389.44 | 1237.22 | 1155.03 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 352.502 | 198.103 | 189.744 | 202.183 |
INF1 | Young developing inflorescences (5mm) | 295.661 | 265.249 | 205.003 | 235.025 |
INF2 | Developing inflorescences (1-1.5 cm) | 158.94 | 132.348 | 121.709 | 178.145 |
ROO | Roots from the seedlings (10 cm shoot stage) | 615.819 | 658.548 | 484.256 | 690.392 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1262.2 | 399.642 | 258.88 | 933.634 |
CAR5 | Developing grain, bracts removed (5 DPA) | 425.006 | 715.352 | 586.828 | 594.281 |
CAR15 | Developing grain, bracts removed (15 DPA) | 30.0102 | 25.9296 | 34.7983 | 70.3771 |
CDS Structure of MLOC_35875
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_35875.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 | None | - | - | - | - | - |
TAIR PP10 |
AT4G13940.4 |
-1 |
3e-13 |
63 |
31/36 (86%) |
| Symbols: HOG1, SAHH1 | S-adenosyl-L-homocysteine hydrolase | chr4:8054931-8056763 FORWARD LENGTH=325 |