MLOC_35867 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.29536.857675.766746.06996
LEAShoots from the seedlings (10 cm shoot stage)3.542612.764575.326862.50796
INF1Young developing inflorescences (5mm)2.710883.166861.348461.60346
INF2Developing inflorescences (1-1.5 cm)3.792592.771954.225783.04291
ROORoots from the seedlings (10 cm shoot stage)5.482844.45485.715174.15366
NODDeveloping tillers at six leaf stage, 3rd internode6.9372210.798610.202724.1709
CAR5Developing grain, bracts removed (5 DPA)3.977714.662694.746393.2156
CAR15Developing grain, bracts removed (15 DPA)2.038232.108092.000923.4015



CDS Structure of MLOC_35867






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_35867.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_35867.1CUST_12179_PI427708083AvailableAvailablecontig_252454 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g32210.1 +1 1e-26 102 56/75 (75%) 13112.m03284 protein autophagy-related protein 10, putative, expressed
TAIR PP10 AT3G07525.1 +1 5e-19 81 45/71 (63%) | Symbols: ATG10, ATATG10 | autophagocytosis-associated family protein | chr3:2399277-2400380 REVERSE LENGTH=225