MLOC_35840 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.706436.861558.325960
LEAShoots from the seedlings (10 cm shoot stage)4.362581.963811.15870
INF1Young developing inflorescences (5mm)33.586821.526218.07450
INF2Developing inflorescences (1-1.5 cm)9.6820213.725816.15470
ROORoots from the seedlings (10 cm shoot stage)9.203866.801149.235910
NODDeveloping tillers at six leaf stage, 3rd internode15.6455.738522.398210
CAR5Developing grain, bracts removed (5 DPA)18.425317.665616.84540
CAR15Developing grain, bracts removed (15 DPA)3.189651.870761.544150



CDS Structure of MLOC_35840






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367368
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367368CUST_25121_PI427708080NoneNoneNone
MLOC_28979.1NoneAvailableNonecontig_1964078 (Not mapped)
MLOC_35840.1NoneAvailableNonecontig_2523496 (Not mapped)
MLOC_41850.1NoneAvailableNonecontig_2609705 (Not mapped)
MLOC_49908.1NoneAvailableNonecontig_35080 (Not mapped)
MLOC_71040.1NoneAvailableAvailablecontig_590263 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----