MLOC_35821 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains68.912971.851276.406563.8228
LEAShoots from the seedlings (10 cm shoot stage)28.872767.9148109.63353.888
INF1Young developing inflorescences (5mm)16.911118.4721.121313.2003
INF2Developing inflorescences (1-1.5 cm)17.821216.462118.674416.5098
ROORoots from the seedlings (10 cm shoot stage)44.040840.400866.855147.6783
NODDeveloping tillers at six leaf stage, 3rd internode20.466114.878719.458852.3238
CAR5Developing grain, bracts removed (5 DPA)23.075123.652226.717620.07
CAR15Developing grain, bracts removed (15 DPA)32.537329.567825.467956.8322



CDS Structure of MLOC_35821






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_35821.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_35821.1CUST_11309_PI427708080AvailableAvailablecontig_2523010 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g44150.1 -2 0.0 571 279/307 (91%) 13103.m04748 protein aminotransferase, putative, expressed
TAIR PP10 AT5G46180.1 -2 1e-156 462 218/307 (71%) | Symbols: DELTA-OAT | ornithine-delta-aminotransferase | chr5:18718766-18721271 REVERSE LENGTH=475