MLOC_35819 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.534420.869215.03420
LEAShoots from the seedlings (10 cm shoot stage)22.778115.374214.85670
INF1Young developing inflorescences (5mm)30.387625.151823.29120
INF2Developing inflorescences (1-1.5 cm)25.863627.497824.830
ROORoots from the seedlings (10 cm shoot stage)6.8530111.76879.739990
NODDeveloping tillers at six leaf stage, 3rd internode11.47759.970139.878940
CAR5Developing grain, bracts removed (5 DPA)18.456815.180316.36990
CAR15Developing grain, bracts removed (15 DPA)2.614332.347272.55760



CDS Structure of MLOC_35819






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373522
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373522CUST_22509_PI427708080NoneNoneNone
MLOC_13587.1NoneAvailableAvailablecontig_1566005 (Mapped)
MLOC_25969.1NoneAvailableNonecontig_1724874 (Not mapped)
MLOC_31781.1NoneAvailableNonecontig_222233 (Not mapped)
MLOC_35819.1NoneAvailableNonecontig_2522914 (Mapped)
MLOC_46169.1NoneAvailableNonecontig_286404 (Not mapped)
MLOC_78470.1NoneAvailableNonecontig_804035 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----