MLOC_35713 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.4260600.78319
LEAShoots from the seedlings (10 cm shoot stage)0.215963000.953901
INF1Young developing inflorescences (5mm)0.20951700.1348550.702074
INF2Developing inflorescences (1-1.5 cm)0.7703430.7443491.454052.63092
ROORoots from the seedlings (10 cm shoot stage)0000.244702
NODDeveloping tillers at six leaf stage, 3rd internode0.09225560.07992450.1332811.67768
CAR5Developing grain, bracts removed (5 DPA)1.194151.248881.188992.87595
CAR15Developing grain, bracts removed (15 DPA)0.6302290.6019570.4651583.36521



CDS Structure of MLOC_35713






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_35713.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_35713.1CUST_11299_PI427708080AvailableAvailablecontig_251863 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g07570.2 -1 4e-19 79 44/75 (59%) 13109.m00609 protein ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed
TAIR PP10None-----