MLOC_3568 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.185736.625674.885174.49143
LEAShoots from the seedlings (10 cm shoot stage)3.601333.061333.561812.51445
INF1Young developing inflorescences (5mm)21.862620.206415.880713.0913
INF2Developing inflorescences (1-1.5 cm)11.459912.744410.92610.9624
ROORoots from the seedlings (10 cm shoot stage)0.886563.145512.401362.62567
NODDeveloping tillers at six leaf stage, 3rd internode00.03530340.249150.286805
CAR5Developing grain, bracts removed (5 DPA)6.458025.059524.882794.4753
CAR15Developing grain, bracts removed (15 DPA)0.645470.3644640.4080570.94049



CDS Structure of MLOC_3568






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_3568.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_3568.1NoneAvailableAvailablecontig_131707 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g16290.2 -1 1e-34 134 76/80 (95%) 13101.m01819 protein DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed
TAIR PP10 AT5G04130.2 -1 6e-32 124 69/85 (81%) DNA GYRASE B2 | chr5:1123729-1128031 REVERSE LENGTH=519