MLOC_35670 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.691525.835624.999822.9948
LEAShoots from the seedlings (10 cm shoot stage)15.69219.513316.859112.477
INF1Young developing inflorescences (5mm)19.898123.781721.971819.0513
INF2Developing inflorescences (1-1.5 cm)17.387120.085819.828620.8484
ROORoots from the seedlings (10 cm shoot stage)19.59920.251716.398218.6297
NODDeveloping tillers at six leaf stage, 3rd internode13.660915.798213.800430.7865
CAR5Developing grain, bracts removed (5 DPA)22.99126.572426.520324.4912
CAR15Developing grain, bracts removed (15 DPA)5.447643.675995.4253511.4483



CDS Structure of MLOC_35670






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_35670.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_35670.1CUST_5005_PI427708083AvailableAvailablecontig_251431 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g29620.1 +3 3e-73 238 122/166 (73%) 13107.m02977 protein OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed
TAIR PP10 AT3G45010.1 +3 8e-46 163 88/168 (52%) | Symbols: scpl48 | serine carboxypeptidase-like 48 | chr3:16466328-16468845 FORWARD LENGTH=510