MLOC_35653 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.44736.415439.256799.41149
LEAShoots from the seedlings (10 cm shoot stage)4.344070.6777590.9636461.80876
INF1Young developing inflorescences (5mm)11.565911.409712.812311.4823
INF2Developing inflorescences (1-1.5 cm)13.133811.414612.627514.8893
ROORoots from the seedlings (10 cm shoot stage)4.391292.981162.675293.93843
NODDeveloping tillers at six leaf stage, 3rd internode0.2685280.80831.0162.65217
CAR5Developing grain, bracts removed (5 DPA)4.519394.521377.447036.36201
CAR15Developing grain, bracts removed (15 DPA)1.979881.347571.770324.8208



CDS Structure of MLOC_35653






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_35653.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_35653.1CUST_5002_PI427708083AvailableAvailablecontig_251259 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g34170.3 +2 9e-66 209 101/116 (87%) 13105.m03548 protein tubulin/FtsZ domain containing protein, putative, expressed
TAIR PP10 AT5G23860.2 +2 2e-66 210 102/116 (88%) | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528 FORWARD LENGTH=449