MLOC_35647 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.35834700.8810890
LEAShoots from the seedlings (10 cm shoot stage)001.096450
INF1Young developing inflorescences (5mm)0.2508770.5596561.968080
INF2Developing inflorescences (1-1.5 cm)00.23530200
ROORoots from the seedlings (10 cm shoot stage)0.641690.35091900
NODDeveloping tillers at six leaf stage, 3rd internode1.357780.1533381.415280
CAR5Developing grain, bracts removed (5 DPA)000.3078270
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_35647






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363511
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363511CUST_20729_PI427708080NoneNoneNone
MLOC_27181.1NoneAvailableNonecontig_181204 (Mapped)
MLOC_35647.1NoneAvailableNonecontig_251200 (Mapped)
MLOC_44703.1NoneAvailableNonecontig_275211 (Mapped)
MLOC_46658.1NoneAvailableNonecontig_293806 (Mapped)
MLOC_56910.1NoneAvailableAvailablecontig_41238 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----