MLOC_35623 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)00.48386200
INF1Young developing inflorescences (5mm)000.11410
INF2Developing inflorescences (1-1.5 cm)0.2234380.4028180.3043430
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.08215350.1097880.02535890
CAR5Developing grain, bracts removed (5 DPA)0.2770920.08195170.1020810
CAR15Developing grain, bracts removed (15 DPA)0.387530.68813400



CDS Structure of MLOC_35623






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK369855
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369855NoneNoneNoneNone
MLOC_30258.1NoneAvailableNonecontig_207794 (Mapped)
MLOC_35623.1NoneAvailableNonecontig_250768 (Not mapped)
MLOC_47364.1NoneAvailableAvailablecontig_304780 (Not mapped)
MLOC_49101.1NoneAvailableNonecontig_335533 (Not mapped)
MLOC_71111.1NoneAvailableNonecontig_591770 (Not mapped)
MLOC_7240.1NoneAvailableNonecontig_138847 (Mapped)
MLOC_7241.1NoneAvailableNonecontig_138847 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----