- Predicted Gene MLOC_35591
MLOC_35591 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 132.942 | 116.522 | 116.688 | 82.764 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 75.858 | 83.0633 | 75.6844 | 45.0698 |
INF1 | Young developing inflorescences (5mm) | 36.8808 | 43.4531 | 37.0049 | 22.0261 |
INF2 | Developing inflorescences (1-1.5 cm) | 25.1514 | 33.9665 | 28.0404 | 23.1355 |
ROO | Roots from the seedlings (10 cm shoot stage) | 61.9454 | 92.2351 | 59.8993 | 67.582 |
NOD | Developing tillers at six leaf stage, 3rd internode | 108.406 | 67.0013 | 62.1505 | 153.598 |
CAR5 | Developing grain, bracts removed (5 DPA) | 88.1452 | 89.3479 | 82.2532 | 59.2316 |
CAR15 | Developing grain, bracts removed (15 DPA) | 17.8282 | 15.4219 | 12.5018 | 26.8125 |
CDS Structure of MLOC_35591
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_35591.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g40470.1 |
-1 |
5e-36 |
132 |
63/67 (94%) |
13101.m04144 protein vacuolar ATP synthase subunit d, putative, expressed |
TAIR PP10 |
AT3G28710.1 |
-1 |
1e-33 |
124 |
58/67 (87%) |
ATPase, V0/A0 complex, subunit C/D | chr3:10773144-10775594 REVERSE LENGTH=351 |