MLOC_35552 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.482340.720650.48090
LEAShoots from the seedlings (10 cm shoot stage)47.683841.939234.14130
INF1Young developing inflorescences (5mm)85.821363.507269.72360
INF2Developing inflorescences (1-1.5 cm)83.057365.064678.47270
ROORoots from the seedlings (10 cm shoot stage)10.36945.414446.27190
NODDeveloping tillers at six leaf stage, 3rd internode33.82477.5190811.77290
CAR5Developing grain, bracts removed (5 DPA)63.352155.774561.15560
CAR15Developing grain, bracts removed (15 DPA)31.317233.257338.50410



CDS Structure of MLOC_35552






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373728
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373728CUST_22542_PI427708080NoneNoneNone
MLOC_27403.1NoneAvailableNonecontig_18286 (Mapped)
MLOC_30829.1NoneAvailableNonecontig_213072 (Mapped)
MLOC_35552.1NoneAvailableNonecontig_249981 (Mapped)
MLOC_43005.1NoneAvailableAvailablecontig_267135 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----