MLOC_35516 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.21121.24624.18790
LEAShoots from the seedlings (10 cm shoot stage)12.590322.240725.00530
INF1Young developing inflorescences (5mm)5.892628.613426.469540
INF2Developing inflorescences (1-1.5 cm)9.241685.9846915.10670
ROORoots from the seedlings (10 cm shoot stage)26.40418.9116.69150
NODDeveloping tillers at six leaf stage, 3rd internode9.716549.7600412.34930
CAR5Developing grain, bracts removed (5 DPA)12.575412.912321.53790
CAR15Developing grain, bracts removed (15 DPA)10.239612.542912.42190



CDS Structure of MLOC_35516






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251444.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251444.1CUST_19013_PI427708080NoneNoneNone
MLOC_27982.1NoneAvailableNonecontig_188054 (Mapped)
MLOC_28695.1NoneAvailableNonecontig_194039 (Not mapped)
MLOC_32450.1NoneAvailableNonecontig_228741 (Not mapped)
MLOC_35516.1NoneAvailableNonecontig_2495898 (Not mapped)
MLOC_41565.1NoneAvailableNonecontig_2595115 (Mapped)
MLOC_41725.1NoneAvailableNonecontig_2603074 (Not mapped)
MLOC_41927.1NoneAvailableNonecontig_2614004 (Not mapped)
MLOC_42150.1NoneAvailableNonecontig_2627146 (Mapped)
MLOC_66041.2NoneAvailableAvailablecontig_51038 (Mapped)
MLOC_80288.1NoneAvailableNonecontig_89632 (Mapped)
MLOC_892.1NoneAvailableNonecontig_107359 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----