MLOC_3545 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.78385 | 12.287 | 11.4061 | 12.9697 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.43609 | 0.978657 | 0.980347 | 2.23924 |
| INF1 | Young developing inflorescences (5mm) | 39.1706 | 36.5874 | 26.5302 | 32.5532 |
| INF2 | Developing inflorescences (1-1.5 cm) | 28.4482 | 39.0518 | 28.1901 | 42.4672 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.79822 | 5.89605 | 5.37539 | 8.20165 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0899286 | 0.078226 | 0.0512703 | 0.280497 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.55918 | 10.1451 | 11.8838 | 12.4206 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.533533 | 0.264473 | 0.715096 | 1.21589 |
CDS Structure of MLOC_3545
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3545.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g32390.1 |
+3 |
0.0 |
908 |
589/806 (73%) |
13107.m03279 protein targeting protein-related, putative, expressed |
| TAIR PP10 |
AT1G03780.2 |
+3 |
2e-159 |
492 |
377/794 (47%) |
| Symbols: TPX2 | targeting protein for XKLP2 | chr1:947785-951696 REVERSE LENGTH=758 |
