MLOC_35440 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.39881.703931.773362.81784
LEAShoots from the seedlings (10 cm shoot stage)01.0712300.76081
INF1Young developing inflorescences (5mm)0.5620070.5670260.7011650.485317
INF2Developing inflorescences (1-1.5 cm)2.120081.165481.157521.72013
ROORoots from the seedlings (10 cm shoot stage)01.1893603.61527
NODDeveloping tillers at six leaf stage, 3rd internode2.050574.36632.8612214.6786
CAR5Developing grain, bracts removed (5 DPA)36.100826.138525.394327.3496
CAR15Developing grain, bracts removed (15 DPA)26.148930.666219.683459.1625



CDS Structure of MLOC_35440






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_35440.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_35440.1CUST_4977_PI427708083AvailableAvailablecontig_248521 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g29130.2 +2 5e-12 61 30/53 (57%) 13102.m03172 protein ankyrin, putative, expressed
TAIR PP10None-----