MLOC_35435 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.182636.256367.452365.58395
LEAShoots from the seedlings (10 cm shoot stage)330.81629.911586.6892124.127
INF1Young developing inflorescences (5mm)0.05822980.064165300.0571376
INF2Developing inflorescences (1-1.5 cm)0.054287200.06662850.107141
ROORoots from the seedlings (10 cm shoot stage)0.7182270.3862131.387510.607837
NODDeveloping tillers at six leaf stage, 3rd internode162.92134.960.101077280.563
CAR5Developing grain, bracts removed (5 DPA)2.436292.494014.174622.89597
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_35435






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_35435.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_35435.1CUST_11271_PI427708080AvailableAvailablecontig_248482 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g05970.1 +1 2e-55 182 95/132 (72%) 13110.m00516 protein POEI12 - Pollen Ole e I allergen and extensin family protein precursor, expressed
TAIR PP10None-----