- Predicted Gene MLOC_35400
MLOC_35400 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_35400_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_35400_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.56544 | 5.45866 | 8.29629 | 6.36224 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 23.8261 | 29.2088 | 25.7037 | 23.6972 |
INF1 | Young developing inflorescences (5mm) | 6.9316 | 4.94401 | 7.42282 | 5.34929 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.57873 | 5.15704 | 4.41187 | 5.78506 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.3631 | 3.25488 | 4.49963 | 6.12084 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.2557 | 18.1187 | 9.84297 | 59.7171 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.97845 | 1.83249 | 2.19404 | 2.30025 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.230057 | 0 | 0.618893 |
CDS Structure of MLOC_35400
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_35400.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g49040.1 |
-2 |
4e-28 |
107 |
77/101 (76%) |
13106.m05230 protein Myb-like DNA-binding domain containing protein, putative, expressed |
TAIR PP10 |
AT3G13040.2 |
-2 |
1e-19 |
84 |
66/103 (64%) |
myb-like HTH transcriptional regulator family protein | chr3:4172415-4174456 REVERSE LENGTH=449 |