MLOC_3540 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 21.3853 | 43.3636 | 44.7745 | 63.4873 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 34.7847 | 32.356 | 26.8733 | 34.2626 |
INF1 | Young developing inflorescences (5mm) | 64.8633 | 58.03 | 46.8106 | 63.7607 |
INF2 | Developing inflorescences (1-1.5 cm) | 56.1388 | 60.9929 | 51.7438 | 90.6113 |
ROO | Roots from the seedlings (10 cm shoot stage) | 13.2542 | 34.7643 | 20.0976 | 65.7826 |
NOD | Developing tillers at six leaf stage, 3rd internode | 11.8759 | 9.55213 | 10.1649 | 45.2945 |
CAR5 | Developing grain, bracts removed (5 DPA) | 73.2263 | 71.2327 | 62.473 | 101.924 |
CAR15 | Developing grain, bracts removed (15 DPA) | 19.0137 | 18.3687 | 15.0807 | 56.3862 |
CDS Structure of MLOC_3540
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3540.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g51500.1 |
-1 |
2e-23 |
103 |
113/183 (62%) |
13105.m05555 protein eukaryotic translation initiation factor 5B, putative, expressed |
TAIR PP10 | None | - | - | - | - | - |