MLOC_35349 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.193875.245486.868075.35094
LEAShoots from the seedlings (10 cm shoot stage)6.051833.863635.053624.19407
INF1Young developing inflorescences (5mm)4.548015.9026.018414.30398
INF2Developing inflorescences (1-1.5 cm)7.700058.797888.330318.75495
ROORoots from the seedlings (10 cm shoot stage)4.294363.866052.13774.34387
NODDeveloping tillers at six leaf stage, 3rd internode4.148385.055063.4904214.8628
CAR5Developing grain, bracts removed (5 DPA)8.132147.533949.071347.70899
CAR15Developing grain, bracts removed (15 DPA)4.964344.369245.1593410.2288



CDS Structure of MLOC_35349






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248907.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248907.1CUST_23217_PI427708080NoneNoneNone
MLOC_32623.1NoneAvailableNonecontig_2303857 (Not mapped)
MLOC_35349.1NoneAvailableAvailablecontig_247700 (Mapped)
MLOC_41588.1NoneAvailableNonecontig_259666 (Mapped)
MLOC_48262.1NoneAvailableNonecontig_320346 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----