MLOC_35288 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains01.488022.098111.83822
LEAShoots from the seedlings (10 cm shoot stage)1.2187300.6216790.840585
INF1Young developing inflorescences (5mm)5.417864.149283.706753.77079
INF2Developing inflorescences (1-1.5 cm)1.418833.554415.676273.64717
ROORoots from the seedlings (10 cm shoot stage)1.406170.7873224.318071.58474
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.6801181.558291.437061.25498
CAR15Developing grain, bracts removed (15 DPA)000.4932750.649819



CDS Structure of MLOC_35288






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_35288.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_35288.1CUST_4953_PI427708083AvailableAvailablecontig_247086 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g56130.1 -3 3e-39 134 63/76 (83%) 13102.m06448 protein PCNA - Putative DNA replicative polymerase clamp, expressed
TAIR PP10 AT2G29570.1 -3 2e-38 131 60/76 (79%) | Symbols: PCNA2, ATPCNA2 | proliferating cell nuclear antigen 2 | chr2:12650139-12651598 REVERSE LENGTH=264