- Predicted Gene MLOC_35155
MLOC_35155 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 107.283 | 77.8985 | 63.9646 | 81.9348 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 41.2924 | 4.17828 | 7.08171 | 13.7548 |
| INF1 | Young developing inflorescences (5mm) | 182.593 | 183.577 | 187.532 | 169.973 |
| INF2 | Developing inflorescences (1-1.5 cm) | 157.603 | 243.436 | 201.681 | 250.573 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 48.4437 | 56.1606 | 62.708 | 63.0895 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.98789 | 3.96091 | 5.19736 | 10.2672 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 67.6366 | 78.3271 | 53.6285 | 73.265 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.25451 | 1.52247 | 2.97158 | 6.57552 |
CDS Structure of MLOC_35155
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_35155.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g34510.1 |
+1 |
6e-51 |
166 |
102/112 (91%) |
13112.m03522 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
| TAIR PP10 |
AT1G54690.1 |
+1 |
6e-49 |
160 |
99/112 (88%) |
| Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX | gamma histone variant H2AX | chr1:20414607-20415206 REVERSE LENGTH=142 |