MLOC_35138 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9048532.742112.162432.06846
LEAShoots from the seedlings (10 cm shoot stage)1.930422.093112.03061.72885
INF1Young developing inflorescences (5mm)4.447774.032275.117963.72496
INF2Developing inflorescences (1-1.5 cm)5.756535.20585.039755.67432
ROORoots from the seedlings (10 cm shoot stage)0.2853391.832111.10661.90415
NODDeveloping tillers at six leaf stage, 3rd internode0.9432361.524351.240354.87082
CAR5Developing grain, bracts removed (5 DPA)2.800292.453372.68962.46082
CAR15Developing grain, bracts removed (15 DPA)0.8455410.9170420.8674731.92088



CDS Structure of MLOC_35138






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_35138.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_35138.3CUST_11252_PI427708080AvailableAvailablecontig_245777 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g07950.1 -2 5e-44 130 66/130 (51%) 13108.m00818 protein NB-ARC domain containing protein, expressed
TAIR PP10 AT1G19260.1 -2 6e-32 108 55/140 (39%) TTF-type zinc finger protein with HAT dimerisation domain | chr1:6657260-6659569 REVERSE LENGTH=769