- Predicted Gene MLOC_35059
- Gene IDMLOC_35059
- Source Contig contig_2454544
MLOC_35059 FPKM values
FPKM by Treatment | FPKM by Replicate |
---|---|
There are no FPKM-by-treatment values calculated for this gene. | ![]() |
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|---|---|---|---|---|
EMB | 4-day embryos dissected from germinating grains | 15.402 | 41.1056 | 31.0733 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 41.5647 | 36.7791 | 33.8127 | 0 |
INF1 | Young developing inflorescences (5mm) | 59.0534 | 69.3251 | 62.1694 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 59.608 | 74.6497 | 56.364 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 19.4062 | 27.1676 | 24.9455 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 20.0955 | 29.2662 | 22.0804 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 39.0436 | 38.1539 | 33.0488 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 21.8407 | 21.137 | 15.2637 | 0 |
CDS Structure of MLOC_35059
![](/morexGenes/blast_net_images/MLOC_35059_assembly3_WGSMorex_rbca.fasta_genes.png)
Members of Gene Cluster
This cluster has a confidence assignment of High Confidence.The gene has a transcript that is part of a cluster represented by AK251104.1
Cluster member | Probe ID | FPKM by replicate | FPKM by treatment | Source Contig |
---|---|---|---|---|
AK251104.1 | CUST_18949_PI427708080 | None | None | None |
MLOC_17797.1 | None | Available | None | contig_1578086 (Mapped) |
MLOC_27332.1 | None | Available | None | contig_1823075 (Mapped) |
MLOC_29898.1 | None | Available | None | contig_204773 (Mapped) |
MLOC_30057.1 | None | Available | None | contig_2060671 (Mapped) |
MLOC_32270.1 | None | Available | None | contig_227033 (Not mapped) |
MLOC_32287.1 | None | Available | None | contig_227167 (Mapped) |
MLOC_35059.1 | None | Available | None | contig_2454544 (Mapped) |
MLOC_41307.1 | None | Available | None | contig_2582023 (Not mapped) |
MLOC_48366.1 | None | Available | None | contig_322239 (Not mapped) |
MLOC_52104.1 | None | Available | None | contig_372875 (Not mapped) |
MLOC_52810.1 | None | Available | None | contig_378121 (Mapped) |
MLOC_66548.1 | None | Available | Available | contig_51741 (Mapped) |
MLOC_76557.1 | None | Available | None | contig_718451 (Not mapped) |
MLOC_78514.1 | None | Available | None | contig_806502 (Not mapped) |
MLOC_78671.1 | None | Available | None | contig_813667 (Not mapped) |
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Rice PP6 | None | - | - | - | - | - |
TAIR PP10 | None | - | - | - | - | - |