MLOC_3502 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.35062 | 1.42641 | 1.45147 | 1.6723 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.7092 | 1.71768 | 2.38816 | 1.48658 |
| INF1 | Young developing inflorescences (5mm) | 3.21857 | 3.09166 | 3.63571 | 2.84509 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.65149 | 2.18463 | 2.86466 | 2.36529 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.64418 | 1.57508 | 2.36539 | 1.95283 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.31619 | 3.11501 | 4.88431 | 8.48266 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.5045 | 1.80667 | 1.5504 | 1.5815 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.150607 | 0 | 0.0628675 | 0.267825 |
CDS Structure of MLOC_3502
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3502.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g14700.1 |
+3 |
1e-91 |
285 |
158/225 (70%) |
13107.m01543 protein harpin-induced protein 1 domain containing protein, expressed |
| TAIR PP10 | None | - | - | - | - | - |
