- Predicted Gene MLOC_35013
MLOC_35013 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_35013_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_35013_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.47272 | 2.24934 | 2.61673 | 2.68189 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.28836 | 0.964028 | 0.385419 | 0.764597 |
INF1 | Young developing inflorescences (5mm) | 0.0366876 | 0 | 0 | 0.0329929 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0196413 | 0 | 0.0235719 | 0.0438698 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.36999 | 7.17715 | 6.93775 | 9.4304 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.6779 | 3.11615 | 9.36691 | 14.8256 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.397214 | 1.28481 | 0.785328 | 1.09347 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.63248 | 5.10075 | 4.43827 | 14.212 |
CDS Structure of MLOC_35013
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_35013.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g63900.1 |
+2 |
6e-153 |
447 |
243/369 (66%) |
13103.m07093 protein 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed |
TAIR PP10 |
AT1G17020.1 |
+2 |
3e-86 |
274 |
161/363 (44%) |
| Symbols: SRG1, ATSRG1 | senescence-related gene 1 | chr1:5820258-5821741 FORWARD LENGTH=358 |