MLOC_35003 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5180060.06423870.08924250.21565
LEAShoots from the seedlings (10 cm shoot stage)00.2291090.4517230.457415
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.2837720.071241400.212982
NODDeveloping tillers at six leaf stage, 3rd internode0.0463976000.00432482
CAR5Developing grain, bracts removed (5 DPA)0.5344700.1317030.350637
CAR15Developing grain, bracts removed (15 DPA)0.102763000.366422



CDS Structure of MLOC_35003






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_35003.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_35003.1CUST_4917_PI427708083AvailableAvailablecontig_245260 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g34910.1 -3 1e-57 186 83/112 (74%) 13110.m03118 protein secretory protein, putative, expressed
TAIR PP10 AT2G15220.1 -3 5e-44 149 71/112 (63%) Plant basic secretory protein (BSP) family protein | chr2:6608689-6609366 FORWARD LENGTH=225