MLOC_34980 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.629652.316531.661122.03473
LEAShoots from the seedlings (10 cm shoot stage)3.10965.370755.012863.29681
INF1Young developing inflorescences (5mm)3.096075.102714.262863.00076
INF2Developing inflorescences (1-1.5 cm)4.289064.44.585124.34218
ROORoots from the seedlings (10 cm shoot stage)6.227326.018464.670216.1612
NODDeveloping tillers at six leaf stage, 3rd internode2.874073.942815.4715611.6897
CAR5Developing grain, bracts removed (5 DPA)4.176024.143753.587493.41347
CAR15Developing grain, bracts removed (15 DPA)0.7724330.5614720.9589051.47773



CDS Structure of MLOC_34980






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34980.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34980.2CUST_12143_PI427708083AvailableAvailablecontig_245162 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g16146.1 -3 8e-19 87 41/54 (76%) 13101.m01794 protein phenazine biosynthesis protein, putative, expressed
TAIR PP10None-----