MLOC_34885 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.817820.936071.281121.37725
LEAShoots from the seedlings (10 cm shoot stage)4.587663.531592.59353.0788
INF1Young developing inflorescences (5mm)0.1599750.1493350.2058160.173473
INF2Developing inflorescences (1-1.5 cm)0.6000750.7008690.8509160.938032
ROORoots from the seedlings (10 cm shoot stage)0.1912060.4473150.66470.634533
NODDeveloping tillers at six leaf stage, 3rd internode0.1900760.6763510.6693242.08099
CAR5Developing grain, bracts removed (5 DPA)11.302213.242611.377114.5725
CAR15Developing grain, bracts removed (15 DPA)1.974641.955843.228726.44835



CDS Structure of MLOC_34885






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34885.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34885.1CUST_11222_PI427708080AvailableAvailablecontig_244864 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g24800.1 -1 3e-119 351 181/230 (79%) 13109.m02361 protein MYB family transcription factor, putative
TAIR PP10 AT3G47600.1 -1 5e-98 296 152/244 (62%) | Symbols: MYB94, ATMYBCP70, ATMYB94 | myb domain protein 94 | chr3:17539627-17541035 REVERSE LENGTH=333