MLOC_34860 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains55.48335.945234.655442.4166
LEAShoots from the seedlings (10 cm shoot stage)28.745920.217825.501320.5416
INF1Young developing inflorescences (5mm)81.530284.294796.318177.5174
INF2Developing inflorescences (1-1.5 cm)118.05882.7959113.356117.153
ROORoots from the seedlings (10 cm shoot stage)43.34543.780942.717650.2687
NODDeveloping tillers at six leaf stage, 3rd internode6.432277.7878924.654731.9621
CAR5Developing grain, bracts removed (5 DPA)31.64238.865237.052537.5012
CAR15Developing grain, bracts removed (15 DPA)12.385811.944911.135429.7006



CDS Structure of MLOC_34860






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34860.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363887NoneNoneNoneNone
MLOC_34860.1CUST_2222_PI427708080AvailableAvailablecontig_244794 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g42920.1 +3 2e-128 383 202/243 (83%) 13108.m04644 protein 60S ribosomal protein L7, putative, expressed
TAIR PP10 AT1G80750.1 +3 1e-65 218 117/240 (49%) Ribosomal protein L30/L7 family protein | chr1:30349052-30350434 FORWARD LENGTH=247