MLOC_3486 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.55423.148253.44813.59918
LEAShoots from the seedlings (10 cm shoot stage)1.992880.6697841.287021.21371
INF1Young developing inflorescences (5mm)1.701082.104432.399771.83804
INF2Developing inflorescences (1-1.5 cm)1.287311.442371.313061.50316
ROORoots from the seedlings (10 cm shoot stage)0.8863220.967551.726361.35223
NODDeveloping tillers at six leaf stage, 3rd internode0.7966961.466340.8295294.54257
CAR5Developing grain, bracts removed (5 DPA)3.100763.260213.494893.2641
CAR15Developing grain, bracts removed (15 DPA)0.9549710.833010.5446042.008



CDS Structure of MLOC_3486






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_3486.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_3486.1CUST_12140_PI427708083AvailableAvailablecontig_131141 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g36600.1 -1 1e-57 196 92/131 (70%) 13102.m03996 protein aldose 1-epimerase, putative, expressed
TAIR PP10 AT5G15140.1 -1 9e-37 140 67/131 (51%) Galactose mutarotase-like superfamily protein | chr5:4908686-4910670 FORWARD LENGTH=490