MLOC_34844 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.161481.431741.71561.56565
LEAShoots from the seedlings (10 cm shoot stage)1.920652.093152.373291.52046
INF1Young developing inflorescences (5mm)5.777726.655377.073645.42233
INF2Developing inflorescences (1-1.5 cm)3.247864.597565.303764.62889
ROORoots from the seedlings (10 cm shoot stage)0.58551.326161.982831.28621
NODDeveloping tillers at six leaf stage, 3rd internode6.507776.0787113.426319.3812
CAR5Developing grain, bracts removed (5 DPA)1.364221.334531.306241.2803
CAR15Developing grain, bracts removed (15 DPA)0.45410.6214360.3794191.25404



CDS Structure of MLOC_34844






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34844.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363071NoneNoneNoneNone
MLOC_34844.1CUST_182_PI427708083AvailableAvailablecontig_244753 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g02620.1 -3 8e-40 149 119/217 (55%) 13108.m00201 protein conserved hypothetical protein
TAIR PP10 AT5G14370.1 -3 3e-21 96 50/110 (45%) CCT motif family protein | chr5:4632147-4633651 REVERSE LENGTH=339