MLOC_34840 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains734.718438.336430.252542.371
LEAShoots from the seedlings (10 cm shoot stage)252.071140.029195.517173.868
INF1Young developing inflorescences (5mm)696.741737.311775.526667.503
INF2Developing inflorescences (1-1.5 cm)693.968620.382616.424772.268
ROORoots from the seedlings (10 cm shoot stage)561.107453.778408.595610.62
NODDeveloping tillers at six leaf stage, 3rd internode23.095140.750296.6612164.611
CAR5Developing grain, bracts removed (5 DPA)407.294426.005407.919456.316
CAR15Developing grain, bracts removed (15 DPA)171.158165.006154.704409.673



CDS Structure of MLOC_34840






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366280
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366280CUST_21273_PI427708080NoneNoneNone
MLOC_34840.2NoneAvailableAvailablecontig_244746 (Mapped)
MLOC_48778.1NoneAvailableNonecontig_329433 (Not mapped)
MLOC_50054.2NoneAvailableNonecontig_353556 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----