MLOC_34826 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains87.7502127.935128.35124.06
LEAShoots from the seedlings (10 cm shoot stage)135.464110.967120.353109.079
INF1Young developing inflorescences (5mm)104.46104.082100.1489.5666
INF2Developing inflorescences (1-1.5 cm)64.283678.852771.560380.2838
ROORoots from the seedlings (10 cm shoot stage)131.009122.568102.458157.555
NODDeveloping tillers at six leaf stage, 3rd internode100.22978.518458.322257.171
CAR5Developing grain, bracts removed (5 DPA)166.409160.769178.541166.437
CAR15Developing grain, bracts removed (15 DPA)41.544640.25644.043295.8011



CDS Structure of MLOC_34826






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249030.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249030.1CUST_18640_PI427708080NoneNoneNone
MLOC_2451.1NoneAvailableNonecontig_121765 (Mapped)
MLOC_31322.1NoneAvailableNonecontig_217907 (Mapped)
MLOC_32233.1NoneAvailableNonecontig_226625 (Mapped)
MLOC_32784.1NoneAvailableNonecontig_2319123 (Not mapped)
MLOC_34826.1NoneAvailableAvailablecontig_244676 (Mapped)
MLOC_41216.1NoneAvailableNonecontig_2577685 (Not mapped)
MLOC_41264.1NoneAvailableNonecontig_2580100 (Mapped)
MLOC_42773.1NoneAvailableNonecontig_2662061 (Not mapped)
MLOC_48901.1NoneAvailableNonecontig_331757 (Not mapped)
MLOC_52648.1NoneAvailableNonecontig_376837 (Mapped)
MLOC_54772.1NoneAvailableNonecontig_393883 (Mapped)
MLOC_77684.1NoneAvailableNonecontig_76706 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----