MLOC_34807 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.729351.395671.810851.87724
LEAShoots from the seedlings (10 cm shoot stage)1.722941.148322.153151.70275
INF1Young developing inflorescences (5mm)7.959598.930629.947698.28917
INF2Developing inflorescences (1-1.5 cm)13.575912.41411.515715.2224
ROORoots from the seedlings (10 cm shoot stage)0.2531421.366161.115741.86917
NODDeveloping tillers at six leaf stage, 3rd internode0.186310.3364551.222781.75203
CAR5Developing grain, bracts removed (5 DPA)3.141973.710673.413083.79665
CAR15Developing grain, bracts removed (15 DPA)2.838252.619052.54066.95096



CDS Structure of MLOC_34807






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34807.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34807.2CUST_4889_PI427708083AvailableAvailablecontig_244630 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g58090.1 -3 1e-50 140 68/84 (81%) 13102.m06725 protein PSP domain containing protein, expressed
TAIR PP10 AT4G21660.2 -3 6e-36 102 50/86 (58%) proline-rich spliceosome-associated (PSP) family protein | chr4:11506259-11509772 REVERSE LENGTH=598