MLOC_34767 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.262615.69215.649416.8372
LEAShoots from the seedlings (10 cm shoot stage)50.869211.783521.92422.9062
INF1Young developing inflorescences (5mm)0.2171870.1387890.02962170.12125
INF2Developing inflorescences (1-1.5 cm)0.04892040.094097600.109822
ROORoots from the seedlings (10 cm shoot stage)51.574226.950620.634731.8103
NODDeveloping tillers at six leaf stage, 3rd internode96.4542127.108102.002334.901
CAR5Developing grain, bracts removed (5 DPA)5.744747.094755.639656.31008
CAR15Developing grain, bracts removed (15 DPA)0.9019831.119890.7100462.45494



CDS Structure of MLOC_34767






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34767.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363688NoneNoneNoneNone
MLOC_34767.1CUST_2209_PI427708080AvailableAvailablecontig_244551 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g30830.1 -3 5e-47 165 107/161 (66%) 13103.m03524 protein X8 domain containing protein, expressed
TAIR PP10 AT5G08000.1 -3 4e-27 109 44/82 (54%) | Symbols: E13L3, PDCB2 | glucan endo-1,3-beta-glucosidase-like protein 3 | chr5:2563684-2565282 FORWARD LENGTH=194