MLOC_34747 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.417760.621720.8539120.812543
LEAShoots from the seedlings (10 cm shoot stage)1.930891.163901.25903
INF1Young developing inflorescences (5mm)1.892331.090640.6370541.05185
INF2Developing inflorescences (1-1.5 cm)00.8734110.5409180.832654
ROORoots from the seedlings (10 cm shoot stage)01.4170903.65635
NODDeveloping tillers at six leaf stage, 3rd internode1.35431.502721.996163.86675
CAR5Developing grain, bracts removed (5 DPA)2.7690102.292892.46719
CAR15Developing grain, bracts removed (15 DPA)2.553311.135532.960824.89426



CDS Structure of MLOC_34747






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34747.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34747.1CUST_11212_PI427708080AvailableAvailablecontig_244512 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g48330.1 -1 3e-18 79 38/60 (63%) 13106.m05138 protein ATEXO70G1, putative, expressed
TAIR PP10 AT4G31540.1 -1 7e-13 63 29/58 (50%) | Symbols: ATEXO70G1, EXO70G1 | exocyst subunit exo70 family protein G1 | chr4:15284739-15286802 REVERSE LENGTH=687