MLOC_34746 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains67.885154.742866.002262.0478
LEAShoots from the seedlings (10 cm shoot stage)32.060738.257641.666631.6395
INF1Young developing inflorescences (5mm)32.770441.987135.584532.6367
INF2Developing inflorescences (1-1.5 cm)20.704825.453724.733826.8475
ROORoots from the seedlings (10 cm shoot stage)89.950762.628367.755280.6848
NODDeveloping tillers at six leaf stage, 3rd internode32.349533.812328.1037104.228
CAR5Developing grain, bracts removed (5 DPA)52.988766.390658.212861.0236
CAR15Developing grain, bracts removed (15 DPA)21.749819.554916.135747.4331



CDS Structure of MLOC_34746






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34746.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365858NoneNoneNoneNone
MLOC_34746.1CUST_2203_PI427708080AvailableAvailablecontig_244512 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g06030.1 +2 4e-153 437 215/244 (88%) 13106.m00604 protein peptidase, T1 family, putative, expressed
TAIR PP10 AT1G13060.1 +2 2e-138 399 190/240 (79%) | Symbols: PBE1 | 20S proteasome beta subunit E1 | chr1:4452641-4454663 FORWARD LENGTH=274