MLOC_3474 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.486414.368716.270714.1348
LEAShoots from the seedlings (10 cm shoot stage)16.460419.062215.089113.398
INF1Young developing inflorescences (5mm)13.287216.047514.918711.8528
INF2Developing inflorescences (1-1.5 cm)11.685612.641413.225813.0024
ROORoots from the seedlings (10 cm shoot stage)20.821520.461519.770722.2534
NODDeveloping tillers at six leaf stage, 3rd internode23.601517.496112.313950.018
CAR5Developing grain, bracts removed (5 DPA)8.181577.810578.706247.55285
CAR15Developing grain, bracts removed (15 DPA)2.922772.493442.894286.0657



CDS Structure of MLOC_3474






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249331.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249331.1CUST_18678_PI427708080NoneNoneNone
MLOC_27673.1NoneAvailableNonecontig_185273 (Mapped)
MLOC_3474.3NoneAvailableAvailablecontig_131075 (Not mapped)
MLOC_38618.1NoneAvailableNonecontig_2550899 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----