MLOC_34735 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains84.093163.254261.919769.8518
LEAShoots from the seedlings (10 cm shoot stage)42.288533.01336.980930.2963
INF1Young developing inflorescences (5mm)65.753273.745768.732463.1228
INF2Developing inflorescences (1-1.5 cm)58.641773.767365.173577.9041
ROORoots from the seedlings (10 cm shoot stage)91.586666.919359.190778.7666
NODDeveloping tillers at six leaf stage, 3rd internode40.311659.82346.5223155.13
CAR5Developing grain, bracts removed (5 DPA)81.410391.886986.363792.3625
CAR15Developing grain, bracts removed (15 DPA)15.281715.100113.085836.1394



CDS Structure of MLOC_34735






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34735.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360106NoneNoneNoneNone
MLOC_34735.1CUST_2201_PI427708080AvailableAvailablecontig_244493 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g04100.1 +2 4e-156 447 221/237 (93%) 13102.m00411 protein peptidase, T1 family, putative, expressed
TAIR PP10 AT5G42790.1 +2 1e-122 361 176/237 (74%) | Symbols: PAF1, ATPSM30, ARS5 | proteasome alpha subunit F1 | chr5:17159270-17160975 REVERSE LENGTH=278