MLOC_34728 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.06377.227778.076348.43318
LEAShoots from the seedlings (10 cm shoot stage)8.373525.39776.538765.90162
INF1Young developing inflorescences (5mm)6.424416.984277.876125.65341
INF2Developing inflorescences (1-1.5 cm)9.0819810.31149.7068910.1095
ROORoots from the seedlings (10 cm shoot stage)7.401465.571945.474927.3005
NODDeveloping tillers at six leaf stage, 3rd internode5.726759.113869.1711231.7793
CAR5Developing grain, bracts removed (5 DPA)8.094658.769848.702787.84847
CAR15Developing grain, bracts removed (15 DPA)4.20364.13653.486728.93632



CDS Structure of MLOC_34728






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34728.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34728.1CUST_12137_PI427708083AvailableAvailablecontig_244478 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g03580.3 +2 7e-52 180 113/160 (71%) 13102.m12352 protein transcription factor, putative, expressed
TAIR PP10 AT2G35530.1 +2 2e-13 72 61/125 (49%) | Symbols: bZIP16, AtbZIP16 | basic region/leucine zipper transcription factor 16 | chr2:14923280-14926025 REVERSE LENGTH=409