MLOC_34684 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.14636400.141549
INF2Developing inflorescences (1-1.5 cm)0.1188410.10877900.195436
ROORoots from the seedlings (10 cm shoot stage)0000.0971415
NODDeveloping tillers at six leaf stage, 3rd internode00.01828400.326672
CAR5Developing grain, bracts removed (5 DPA)0.143115000.179739
CAR15Developing grain, bracts removed (15 DPA)0.4658270.1615320.6960711.75564



CDS Structure of MLOC_34684






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34684.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34684.1CUST_4873_PI427708083AvailableAvailablecontig_2443735 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g13740.1 -1 3e-33 114 54/94 (57%) 13106.m01516 protein transposon protein, putative, unclassified
TAIR PP10 AT4G15090.1 -1 2e-11 62 33/94 (35%) | Symbols: FAR1 | FRS (FAR1 Related Sequences) transcription factor family | chr4:8614806-8617870 FORWARD LENGTH=827