MLOC_34665 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.042623.176452.796462.13501
LEAShoots from the seedlings (10 cm shoot stage)2.75753.127712.659611.98662
INF1Young developing inflorescences (5mm)3.501053.322593.941242.31423
INF2Developing inflorescences (1-1.5 cm)3.292553.481253.68513.0307
ROORoots from the seedlings (10 cm shoot stage)1.562582.345733.150322.12614
NODDeveloping tillers at six leaf stage, 3rd internode4.312793.13363.235358.60685
CAR5Developing grain, bracts removed (5 DPA)2.900772.746122.851092.09079
CAR15Developing grain, bracts removed (15 DPA)1.128131.19190.9972171.98583



CDS Structure of MLOC_34665






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34665.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34665.2NoneAvailableAvailablecontig_244344 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g53780.1 -1 2e-76 262 139/184 (76%) 13102.m06151 protein expressed protein
TAIR PP10 AT2G06005.1 -1 1e-57 207 103/182 (57%) | Symbols: FIP1 | FRIGIDA interacting protein 1 | chr2:2332583-2336022 FORWARD LENGTH=355