MLOC_34662 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.14219.96920.010921.4536
LEAShoots from the seedlings (10 cm shoot stage)29.98843.697754.662336.6596
INF1Young developing inflorescences (5mm)4.036955.743964.088694.51466
INF2Developing inflorescences (1-1.5 cm)5.818234.60045.011536.05735
ROORoots from the seedlings (10 cm shoot stage)49.873450.689850.983660.0263
NODDeveloping tillers at six leaf stage, 3rd internode51.153744.92146.0872126.961
CAR5Developing grain, bracts removed (5 DPA)2.919912.620913.234133.08648
CAR15Developing grain, bracts removed (15 DPA)1.069031.178991.291063.18015



CDS Structure of MLOC_34662






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34662.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356374NoneNoneNoneNone
MLOC_34662.1CUST_17996_PI427708080AvailableAvailablecontig_244340 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g37432.1 +3 0.0 711 383/458 (84%) 13108.m03939 protein MATE efflux family protein, putative, expressed
TAIR PP10 AT5G65380.1 +3 0.0 540 279/448 (62%) MATE efflux family protein | chr5:26123241-26126352 REVERSE LENGTH=486